{"database": "scout", "table": "v_kd", "is_view": true, "human_description_en": "where assay_method = \"flow_cytometry\", sequence_status = \"pending_supp_oa\" and verification_level = \"extraction_verified\" sorted by kd_log10_molar", "rows": [[202, "CD8a", "protein", "P01732", "A3", null, "1.9 nM", -8.721, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "31209354", "10.1038/s41551-019-0411-6", "the A1, A3 and A8 aptamers have apparent K D values of 18.3 \u00b1 4.6, 1.9 \u00b1 0.8 and 2.4 \u00b1 0.9  nM, respectively", "step2c_literal_v3"], [203, "CD8a", "protein", "P01732", "A8", null, "2.4 nM", -8.62, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "31209354", "10.1038/s41551-019-0411-6", "the A1, A3 and A8 aptamers have apparent K D values of 18.3 \u00b1 4.6, 1.9 \u00b1 0.8 and 2.4 \u00b1 0.9  nM, respectively", "step2c_literal_v3"], [226, "transferrin receptor 1", "protein", "P02786", "JBA8.26", null, "3.3 nM", -8.481, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "35875870", "10.1021/jacs.2c05349", "JBA8.26 bound TfR1 hi H9 T-lymphoma cells with an apparent K D of 3.3 \u00b1 0.6 nM", "step2c_literal_v3"], [224, "transferrin receptor 1", "protein", "P02786", "JBA8.1", null, "5.5 nM", -8.26, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", "fluorescein-labeled", "35875870", "10.1021/jacs.2c05349", "JBA8.1 has an apparent binding affinity (K D ) of 5.5 \u00b1 1.2 nM", "step2c_literal_v3"], [225, "transferrin receptor 1", "protein", "P02786", "tJBA8.1", null, "10.9 nM", -7.963, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "35875870", "10.1021/jacs.2c05349", "versus that of 10.9 \u00b1 2.4 nM for tJBA8.1", "step2c_literal_v3"], [201, "CD8a", "protein", "P01732", "A1", null, "18.3 nM", -7.738, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "31209354", "10.1038/s41551-019-0411-6", "the A1, A3 and A8 aptamers have apparent K D values of 18.3 \u00b1 4.6, 1.9 \u00b1 0.8 and 2.4 \u00b1 0.9  nM, respectively", "step2c_literal_v3"], [227, "transferrin receptor 1", "protein", "P02786", "tJBA8.1", null, "25.6 nM", -7.592, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", null, null, null, null, "DNA", null, "35875870", "10.1021/jacs.2c05349", "compared to tJBA8.1's apparent K D of 25.6 \u00b1 13.0 nM for these cells", "step2c_literal_v3"], [222, "CD20", "protein", "P11836", "WB1-CD20", null, "73.0 nM", -7.137, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 298.15, null, "Cell Suspension Buffer (CSB)", null, "DNA", "5'-FAM", "35829681", "10.1021/acs.biochem.2c00105", "The apparent affinities of WB1-CD20 and WB2-CD20 were calculated as 73 nM and 163 nM at 25\u00b0C, respectively", "step2c_literal_v3"], [220, "CD19", "protein", "P15391", "WB15-CD19", null, "153.0 nM", -6.815, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 298.15, null, "Cell Suspension Buffer (CSB)", null, "DNA", "5'-FAM", "35829681", "10.1021/acs.biochem.2c00105", "At 25 \u00b0C, WB15-CD19 showed an apparent affinity of 153 nM", "step2c_literal_v3"], [223, "CD20", "protein", "P11836", "WB2-CD20", null, "163.0 nM", -6.788, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 298.15, null, "Cell Suspension Buffer (CSB)", null, "DNA", "5'-FAM", "35829681", "10.1021/acs.biochem.2c00105", "The apparent affinities of WB1-CD20 and WB2-CD20 were calculated as 73 nM and 163 nM at 25\u00b0C, respectively", "step2c_literal_v3"], [221, "CD19", "protein", "P15391", "WB17-CD19", null, "187.0 nM", -6.728, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 298.15, null, "Cell Suspension Buffer (CSB)", null, "DNA", "5'-FAM", "35829681", "10.1021/acs.biochem.2c00105", "and WB17-CD19 showed an apparent affinity of 187 nM (Figure S12A-B).", "step2c_literal_v3"], [263, "H-6 cells", "cell/EV", "O14756", "Apta25", null, "0.42 \u00b5M", -6.377, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "H-6 cells showed binding with Apta25 ( K D value-0.42 \u00b1 0.093 \u00b5 m)", "step2c_literal_v3"], [261, "K-1 cells", "cell/EV", "O60814", "Apta30", null, "0.66 \u00b5M", -6.18, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "Apta30 ( K D -0.66 \u00b1 0.12 \u00b5 m)", "step2c_literal_v3"], [264, "H-6 cells", "cell/EV", "O14756", "Apta30", null, "1.107 \u00b5M", -5.956, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "H-6 cells showed binding with ... Apta30 ( K D -1.107 \u00b1 0.208 \u00b5 m)", "step2c_literal_v3"], [262, "K-1 cells", "cell/EV", "O60814", "Apta25", null, "1.358 \u00b5M", -5.867, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "Apta25 ( K D value-1.358 \u00b1 0.201 \u00b5 m)", "step2c_literal_v3"], [259, "K-1 cells", "cell/EV", "O60814", "Apta02", null, "1.821 \u00b5M", -5.74, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "Apta02 ( K D value-1.821 \u00b1 0.117 \u00b5 m)", "step2c_literal_v3"], [260, "K-1 cells", "cell/EV", "O60814", "Apta04", null, "1.867 \u00b5M", -5.729, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "Apta04 ( K D value-1.867 \u00b1 0.19 \u00b5 m)", "step2c_literal_v3"], [265, "H-9 cells", "cell/EV", "Q8IVB4", "Apta02", null, "4.93 \u00b5M", -5.307, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "H-9 cells showed binding with Apta02 ( K D value-4.93 \u00b1 0.367 \u00b5 m)", "step2c_literal_v3"], [266, "H-9 cells", "cell/EV", "Q8IVB4", "Apta04", null, "5.402 \u00b5M", -5.267, "non_intrinsic", "Kd", "Gold", "v4", "extraction_verified", "pending_supp_oa", null, null, "flow_cytometry", 310.15, null, null, null, "DNA", null, "40487293", "10.1002/adfm.202425394", "H-9 cells showed binding with ... Apta04 ( K D value-5.402 \u00b1 0.795 \u00b5 m)", "step2c_literal_v3"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["id", "target_name_canonical", "target_type", "target_uniprot", "aptamer_name", "aptamer_seq", "kd_reported", "kd_log10_molar", "measurement_class", "binding_constant_type", "tier", "source_origin", "verification_level", "sequence_status", "seq_source", "pi_provenance_flag", "assay_method", "assay_temperature_k", "assay_ph", "assay_buffer", "assay_cations", "aptamer_chemistry", "aptamer_modifications", "source_pmid", "doi", "verbatim_quote", "source_db"], "primary_keys": [], "units": {}, "query": {"sql": "select id, target_name_canonical, target_type, target_uniprot, aptamer_name, aptamer_seq, kd_reported, kd_log10_molar, measurement_class, binding_constant_type, tier, source_origin, verification_level, sequence_status, seq_source, pi_provenance_flag, assay_method, assay_temperature_k, assay_ph, assay_buffer, assay_cations, aptamer_chemistry, aptamer_modifications, source_pmid, doi, verbatim_quote, source_db from v_kd where \"assay_method\" = :p0 and \"sequence_status\" = :p1 and \"verification_level\" = :p2 order by kd_log10_molar limit 51", "params": {"p0": "flow_cytometry", "p1": "pending_supp_oa", "p2": "extraction_verified"}}, "facet_results": {"measurement_class": {"name": "measurement_class", "type": "column", "hideable": false, "toggle_url": "/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified", "results": [{"value": "non_intrinsic", "label": "non_intrinsic", "count": 19, "toggle_url": "https://apt-scout.org/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified&measurement_class=non_intrinsic", "selected": false}], "truncated": false}, "target_type": {"name": "target_type", "type": "column", "hideable": false, "toggle_url": "/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified", "results": [{"value": "protein", "label": "protein", "count": 11, "toggle_url": "https://apt-scout.org/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified&target_type=protein", "selected": false}, {"value": "cell/EV", "label": "cell/EV", "count": 8, "toggle_url": "https://apt-scout.org/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified&target_type=cell%2FEV", "selected": false}], "truncated": false}, "tier": {"name": "tier", "type": "column", "hideable": false, "toggle_url": "/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified", "results": [{"value": "Gold", "label": "Gold", "count": 19, "toggle_url": "https://apt-scout.org/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified&tier=Gold", "selected": false}], "truncated": false}, "assay_method": {"name": "assay_method", "type": "column", "hideable": false, "toggle_url": "/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified", "results": [{"value": "flow_cytometry", "label": "flow_cytometry", "count": 19, "toggle_url": "https://apt-scout.org/scout/v_kd.json?sequence_status=pending_supp_oa&verification_level=extraction_verified", "selected": true}], "truncated": false}, "binding_constant_type": {"name": "binding_constant_type", "type": "column", "hideable": false, "toggle_url": "/scout/v_kd.json?assay_method=flow_cytometry&sequence_status=pending_supp_oa&verification_level=extraction_verified", "results": [{"value": "Kd", "label": "Kd", "count": 19, "toggle_url": 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null, "private": false, "allow_execute_sql": true, "query_ms": 44.89468317478895, "source": "apt-scout automated curation pipeline (E. Dohi, NCNP) \u2014 values harvested from public databases; raw source stored per target", "source_url": "https://apt-scout.org", "license": "CC BY 4.0", "license_url": "https://creativecommons.org/licenses/by/4.0/"}