target_layer1_structure: A0A340WVW7
This data as json
| target_id | pdb_count_total | pdb_count_detailed | pdb_best_resolution_A | alphafold_mean_pLDDT | alphafold_model_count | emdb_count | has_cryoEM | has_xray | has_NMR | raw_json | recorded_utc |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A0A340WVW7 | 2 | 2 | 92.75 | 1 | 2 | 1 | 0 | 0 | {"pdb": {"uniprot_id": "A0A340WVW7", "pdb_count_total": 2, "pdb_count_detailed": 2, "entries": [{"pdb_id": "7QGG", "title": "Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state", "keywords": "RIBOSOME", "resolution": 2.86, "method": "ELECTRON MICROSCOPY", "deposit_date": "2021-12-08T00:00:00.000+00:00", "release_date": "2022-10-26T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "18", "chains": ["SX"], "description": "40S ribosomal protein S23", "length": 143}], "ligands": [{"comp_id": "MAGNESIUM ION", "chem_id": "MG"}, {"comp_id": "ZINC ION", "chem_id": "ZN"}], "primary_citation": {"title": "Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state.", "doi": null, "pmid": null, "journal": "J Mol Biology", "year": 2022, "authors": ["Kipper, K.", "Mansour, A.", "Pulk, A."]}, "related_emdb": ["EMD-13954"]}, {"pdb_id": "7QVP", "title": "Human collided disome (di-ribosome) stalled on XBP1 mRNA", "keywords": "TRANSLATION", "resolution": 3.0, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-10-12T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "74", "chains": ["RX", "SX"], "description": "40S ribosomal protein S23", "length": 143}], "ligands": [], "primary_citation": {"title": "A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.", "doi": null, "pmid": null, "journal": "Nat Commun", "year": 2022, "authors": ["Narita, M.", "Denk, T.", "Matsuo, Y.", "Sugiyama, T.", "Kikuguchi, C.", "Ito, S."]}, "related_emdb": ["EMD-14181"]}]}, "alphafold": {"uniprot_id": "A0A340WVW7", "model_count": 1, "models": [{"entryId": "AF-A0A340WVW7-F1", "uniprotAccession": "A0A340WVW7", "uniprotDescription": "Small ribosomal subunit protein uS12", "organismScientificName": "Lipotes vexillifer", "sequenceLength": null, "globalMetricValue": 92.75, "modelCreatedDate": "2022-06-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A340WVW7-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A340WVW7-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A340WVW7-F1-predicted_aligned_error_v6.png"}]}, "emdb": {"uniprot_id": "A0A340WVW7", "emdb_count": 2, "entries": [{"emdb_id": "EMD-13954", "title": null, "resolution_A": null, "deposit_date": "2021-12-08T00:00:00", "release_date": "2022-10-26T00:00:00", "method": "electron microscopy"}, {"emdb_id": "EMD-14181", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-10-12T00:00:00", "method": "electron microscopy"}]}} | 2026-05-27T10:45:01.507411+00:00 |