target_layer1_structure: A0A5C2GQT9
This data as json
| target_id | pdb_count_total | pdb_count_detailed | pdb_best_resolution_A | alphafold_mean_pLDDT | alphafold_model_count | emdb_count | has_cryoEM | has_xray | has_NMR | raw_json | recorded_utc |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A0A5C2GQT9 | 5 | 5 | 96.38 | 1 | 5 | 1 | 0 | 0 | {"pdb": {"uniprot_id": "A0A5C2GQT9", "pdb_count_total": 5, "pdb_count_detailed": 5, "entries": [{"pdb_id": "7WON", "title": "Cryo-EM structure of SARS-CoV-2 S2P trimer in complex with neutralizing antibody VacW-209 (local refinement)", "keywords": "VIRAL PROTEIN/IMMUNE SYSTEM", "resolution": 3.9, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-07-13T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "2", "chains": ["L"], "description": "VacW-209 light chain", "length": 111}], "ligands": [], "primary_citation": {"title": "Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.", "doi": null, "pmid": null, "journal": "Cell Res", "year": 2022, "authors": ["Ju, B.", "Zheng, Q.", "Guo, H.", "Fan, Q.", "Li, T.", "Song, S."]}, "related_emdb": ["EMD-32652"]}, {"pdb_id": "7WP0", "title": "Cryo-EM structure of SARS-CoV-2 Delta S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)", "keywords": "IMMUNE SYSTEM/VIRAL PROTEIN", "resolution": 3.71, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-07-20T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["L"], "description": "IG c335_light_IGLV1-40_IGLJ3", "length": 111}], "ligands": [{"comp_id": "2-acetamido-2-deoxy-beta-D-glucopyranose", "chem_id": "NAG"}], "primary_citation": {"title": "Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.", "doi": null, "pmid": null, "journal": "Cell Res", "year": 2022, "authors": ["Ju, B.", "Zheng, Q.", "Guo, H.", "Fan, Q.", "Li, T.", "Song, S."]}, "related_emdb": ["EMD-32665"]}, {"pdb_id": "7WP1", "title": "Cryo-EM structure of SARS-CoV-2 Mu S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)", "keywords": "IMMUNE SYSTEM/VIRAL PROTEIN", "resolution": 3.77, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-07-13T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["L"], "description": "VacW-209 light chain", "length": 111}], "ligands": [], "primary_citation": {"title": "Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.", "doi": null, "pmid": null, "journal": "Cell Res", "year": 2022, "authors": ["Ju, B.", "Zheng, Q.", "Guo, H.", "Fan, Q.", "Li, T.", "Song, S."]}, "related_emdb": ["EMD-32666"]}, {"pdb_id": "7WP2", "title": "Cryo-EM structure of SARS-CoV-2 C.1.2 S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)", "keywords": "IMMUNE SYSTEM/VIRAL PROTEIN", "resolution": 3.52, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-07-20T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["L"], "description": "VacW-209 light chain", "length": 111}], "ligands": [], "primary_citation": {"title": "Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.", "doi": null, "pmid": null, "journal": "Cell Res", "year": 2022, "authors": ["Ju, B.", "Zheng, Q.", "Guo, H.", "Fan, Q.", "Li, T.", "Song, S."]}, "related_emdb": ["EMD-32667"]}, {"pdb_id": "7WP5", "title": "Cryo-EM structure of SARS-CoV-2 Omicron S6P trimer in complex with neutralizing antibody VacW-209 (local refinement)", "keywords": "IMMUNE SYSTEM/VIRAL PROTEIN", "resolution": 3.9, "method": "ELECTRON MICROSCOPY", "deposit_date": "2022-01-22T00:00:00.000+00:00", "release_date": "2022-07-13T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["L"], "description": "VacW-209 light chain", "length": 111}], "ligands": [], "primary_citation": {"title": "Immune escape by SARS-CoV-2 Omicron variant and structural basis of its effective neutralization by a broad neutralizing human antibody VacW-209.", "doi": null, "pmid": null, "journal": "Cell Res", "year": 2022, "authors": ["Ju, B.", "Zheng, Q.", "Guo, H.", "Fan, Q.", "Li, T.", "Song, S."]}, "related_emdb": ["EMD-32669"]}]}, "alphafold": {"uniprot_id": "A0A5C2GQT9", "model_count": 1, "models": [{"entryId": "AF-A0A5C2GQT9-F1", "uniprotAccession": "A0A5C2GQT9", "uniprotDescription": "IG c335_light_IGLV1-40_IGLJ3", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 96.38, "modelCreatedDate": "2022-06-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A5C2GQT9-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A5C2GQT9-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0A5C2GQT9-F1-predicted_aligned_error_v6.png"}]}, "emdb": {"uniprot_id": "A0A5C2GQT9", "emdb_count": 5, "entries": [{"emdb_id": "EMD-32652", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-07-13T00:00:00", "method": "electron microscopy"}, {"emdb_id": "EMD-32665", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-07-20T00:00:00", "method": "electron microscopy"}, {"emdb_id": "EMD-32666", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-07-13T00:00:00", "method": "electron microscopy"}, {"emdb_id": "EMD-32667", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-07-20T00:00:00", "method": "electron microscopy"}, {"emdb_id": "EMD-32669", "title": null, "resolution_A": null, "deposit_date": "2022-01-22T00:00:00", "release_date": "2022-07-13T00:00:00", "method": "electron microscopy"}]}} | 2026-05-27T10:45:01.393769+00:00 |