target_layer1_structure: A0FGR8
This data as json
| target_id | pdb_count_total | pdb_count_detailed | pdb_best_resolution_A | alphafold_mean_pLDDT | alphafold_model_count | emdb_count | has_cryoEM | has_xray | has_NMR | raw_json | recorded_utc |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A0FGR8 | 4 | 4 | 73.44 | 5 | 0 | 0 | 1 | 1 | {"pdb": {"uniprot_id": "A0FGR8", "pdb_count_total": 4, "pdb_count_detailed": 4, "entries": [{"pdb_id": "2DMG", "title": "Solution structure of the third C2 domain of KIAA1228 protein", "keywords": "LIPID BINDING PROTEIN", "resolution": null, "method": "SOLUTION NMR", "deposit_date": "2006-04-21T00:00:00.000+00:00", "release_date": "2006-10-21T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["A"], "description": "KIAA1228 protein", "length": 142}], "ligands": [], "primary_citation": {"title": "Solution structure of the third C2 domain of KIAA1228 protein", "doi": null, "pmid": null, "journal": "To be published", "year": null, "authors": ["Nagashima, T.", "Hayashi, F.", "Yokoyama, S."]}, "related_emdb": []}, {"pdb_id": "4NPJ", "title": "Extended-Synaptotagmin 2, C2A- and C2B-domains", "keywords": "MEMBRANE PROTEIN", "resolution": 2.101, "method": "X-RAY DIFFRACTION", "deposit_date": "2013-11-21T00:00:00.000+00:00", "release_date": "2014-01-29T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["A", "B"], "description": "Extended synaptotagmin-2", "length": 299}], "ligands": [{"comp_id": "CHLORIDE ION", "chem_id": "CL"}, {"comp_id": "SODIUM ION", "chem_id": "NA"}, {"comp_id": "ACETATE ION", "chem_id": "ACT"}], "primary_citation": {"title": "Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.", "doi": null, "pmid": null, "journal": "Structure", "year": 2014, "authors": ["Xu, J.", "Bacaj, T.", "Zhou, A.", "Tomchick, D.R.", "Sudhof, T.C.", "Rizo, J."]}, "related_emdb": []}, {"pdb_id": "4NPK", "title": "Extended-Synaptotagmin 2, C2A- and C2B-domains, calcium bound", "keywords": "MEMBRANE PROTEIN", "resolution": 2.552, "method": "X-RAY DIFFRACTION", "deposit_date": "2013-11-21T00:00:00.000+00:00", "release_date": "2014-01-29T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["A"], "description": "Extended synaptotagmin-2", "length": 299}], "ligands": [{"comp_id": "CALCIUM ION", "chem_id": "CA"}], "primary_citation": {"title": "Structure and ca(2+)-binding properties of the tandem c2 domains of e-syt2.", "doi": null, "pmid": null, "journal": "Structure", "year": 2014, "authors": ["Xu, J.", "Bacaj, T.", "Zhou, A.", "Tomchick, D.R.", "Sudhof, T.C.", "Rizo, J."]}, "related_emdb": []}, {"pdb_id": "4P42", "title": "Extended-Synaptotagmin 2, SMP - C2A - C2B Domains", "keywords": "LIPID TRANSPORT", "resolution": 2.44, "method": "X-RAY DIFFRACTION", "deposit_date": "2014-03-10T00:00:00.000+00:00", "release_date": "2014-05-14T00:00:00.000+00:00", "my_uniprot_chains": [{"entity_id": "1", "chains": ["A", "B"], "description": "Extended synaptotagmin-2", "length": 474}], "ligands": [{"comp_id": "2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY", "chem_id": "EGC"}, {"comp_id": "1,2-dioleoyl-sn-glycero-3-phosphoethanolamine", "chem_id": "PEE"}], "primary_citation": {"title": "Structure of a lipid-bound extended synaptotagmin indicates a role in lipid transfer.", "doi": null, "pmid": null, "journal": "Nature", "year": 2014, "authors": ["Schauder, C.M.", "Wu, X.", "Saheki, Y.", "Narayanaswamy, P.", "Torta, F.", "Wenk, M.R."]}, "related_emdb": []}]}, "alphafold": {"uniprot_id": "A0FGR8", "model_count": 5, "models": [{"entryId": "AF-A0FGR8-F1", "uniprotAccession": "A0FGR8", "uniprotDescription": "Extended synaptotagmin-2", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 73.44, "modelCreatedDate": "2025-08-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-F1-predicted_aligned_error_v6.png"}, {"entryId": "AF-A0FGR8-6-F1", "uniprotAccession": "A0FGR8-6", "uniprotDescription": "Extended synaptotagmin-2", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 72.5, "modelCreatedDate": "2025-08-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-6-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-6-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-6-F1-predicted_aligned_error_v6.png"}, {"entryId": "AF-A0FGR8-5-F1", "uniprotAccession": "A0FGR8-5", "uniprotDescription": "Extended synaptotagmin-2", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 74.62, "modelCreatedDate": "2025-08-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-5-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-5-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-5-F1-predicted_aligned_error_v6.png"}, {"entryId": "AF-A0FGR8-4-F1", "uniprotAccession": "A0FGR8-4", "uniprotDescription": "Extended synaptotagmin-2", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 83.38, "modelCreatedDate": "2025-08-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-4-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-4-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-4-F1-predicted_aligned_error_v6.png"}, {"entryId": "AF-A0FGR8-2-F1", "uniprotAccession": "A0FGR8-2", "uniprotDescription": "Extended synaptotagmin-2", "organismScientificName": "Homo sapiens", "sequenceLength": null, "globalMetricValue": 74.88, "modelCreatedDate": "2025-08-01T00:00:00Z", "latestVersion": 6, "cifUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-2-F1-model_v6.cif", "pdbUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-2-F1-model_v6.pdb", "paeImageUrl": "https://alphafold.ebi.ac.uk/files/AF-A0FGR8-2-F1-predicted_aligned_error_v6.png"}]}, "emdb": {"uniprot_id": "A0FGR8", "emdb_count": 0, "entries": []}} | 2026-05-27T10:45:02.153009+00:00 |